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JGI@25: Building a Better Bean
… capabilities to enable great science that will help solve energy and environmental challenges. While a hill of beans … use Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, meaning the plant’s reduced genetic diversity makes it easier to …
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Four Researchers Join JGI User Executive Committee
… Committee of the Joint Genome Institute, a Department of Energy user facility located at Lawrence Berkeley National … professor at Michigan State University. He studies fungal biodiversity, ecology, and evolution, with a focus on … in association with both domesticated and wild animal and plant hosts. One main focus of his service to the community …
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A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
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Transcriptional response of the white-rot fungus Dichomitus squalens to polysaccharides reveals a co-expression network of plant biomass conversion related genes
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The Exometabolome of Xylella fastidiosa in Contact with Paraburkholderia phytofirmans Supernatant Reveals Changes in Nicotinamide, Amino Acids, Biotin, and Plant Hormones
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Multilevel analysis between Physcomitrium patens and Mortierellaceae endophytes explores potential long‐standing interaction among land plants and fungi
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Plant genotype and rhizobia strain combinations strongly influence the transcriptome under heavy metal stress conditions in Medicago truncatula
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Eucalyptus grandis MYB‐Like and RAN‐Like Zinc Finger Proteins Display Dual Roles in Regulating Plant Immunity and Symbiosis Pathways
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A Community Resource for Secondary Metabolite Researchers
… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a set … and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … U.S. Department of Energy Joint Genome Institute (https:// ror.org/04xm1d337), …
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Leo Baumgart
… of JGI user science projects spanning bacteria, fungi, and plants. His team is also developing single-nuclei sequencing … regulation at the level of individual cells across diverse plant tissues. Dr. Baumgart focuses on expanding functional … "Recruitment, rewiring and deep conservation in flowering plant gene regulation." Nature Plants 11, no. 8 (2025): …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, …
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Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts
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