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Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative metabolism occurs in … To demonstrate the potential utility of the browser, the team used  Fermentation Explorer ( GitHub ) with a series of … to predict the final end products from these genomes. The team then cultured the organisms and found general agreement …

… of global nutrient cycles. The JGI’s latest strategic plan (download a copy  here ) describes how understanding these … genomes. This includes (i) classifying viruses into groups that can be compared across studies, (ii) predicting … supported by NIH Common Fund grant 1U01DE034196-01. The JGI team, including Kyrpides, Camargo, and Roux, has an …

Genome Institute (JGI)—have selected 11 proposals for support from 53 received through a joint research call. … under fluctuating environmental conditions. The team aims to functionally link gene families to … comes from Malak Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field …

… and algae’s roles in nutrient cycling, now a facet of the  Fungal & Algal Program . For example, green algae represent the largest group of primary producers generating organic compounds through … genome sequences from underrepresented green algae groups in a wide range of environments. A similar proposal …

… sure we could even complete a full project. Every other group I contacted was happy to offer advice but declined to … thank JGI enough for being willing to take a risk on a group of public high school students to see this project … the resources as a user facility. The Metagenome Program team provided guidance and encouragement to submit a …

… its habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at … consequences. A previous study conducted by our research team surveying the genomic and phenotypic diversity across … idea that 8X switchgrass was an unremarkable, homogenous group and raised several important questions. Where did the 8X …

… longer looks or quacks like one, is it still a duck? For a team led by researchers from The Ohio State University and … and metabolomics analysis and microscopy at EMSL. The team infected the marine  Pseudoalteromonas bacterium with …

JGI’s Zhong Wang and Science Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant … funded by the National Science Foundation (NSF) that supports underrepresented minorities in science, technology, … illness, disease risk, and treatment response due to fungal genomics internship with Igor Grigoriev. Portia Mira …

… scientist in Nikos Kyrpides’  Microbiome Data Science group. “What makes this study really stand out from previous … about the biology and diversity of uncultured microbes.” Teams of researchers worked on multiple analyses harnessing the genome repository, and the IMG/M team developed several updates and features to mine the GEM …

… that partnership, the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene … spans 15 years and involves more than 17 research groups. The team set out to characterize the transcriptome – … Plant Gene Atlas, a dedicated portal where you can do bulk downloads of data and look at the expression of a single …

… produced in response to hardship or competition. They make up the foundation for a slew of vital products in … Institute, a DOE Office of Science User Facility, is supported under contract DE-AC02- 05CH11231. …

Virginia University (WVU), led the study’s international team, which included scientists from Oak Ridge National … The results were published in  Genome Biology . The team found that the shrub willow’s W chromosome has … two species and, perhaps, more generally. … This work was supported by the NSF Dimensions of Biodiversity Program …