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… at the University of Hawai’i at Mānoa. I recently caught up with Karolina at the Plant and Animal Genomes, or PAG … in general, work. KAROLINA:  We all know plants take up water through their roots. But for them to be able to … role. But other plants, which do CAM, can kind of clam up during the day, and open their stomata at night to absorb …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same … for each gene. These bacterial RNA polymerases are made up of a core enzyme complex as well as a sigma factor. While …

… experiences.  Genomic data scientist Deanna Beatty sat down with interns hosted at the JGI through three different … participated in the SEED Scholars @ LBNL program,  with support from  the SEED program at UC Berkeley. Sally Liao … Jacobs : I have a poster session actually, like just a couple days from now. So I've been thinking about science …

… as polyploidy. The multiple copies arise from past genome duplication, which occurs in two basic ways. In “autopolyploids”, genome duplication occurs within a single species. By contrast, … figure outlines the general methodology he and Rokhsar came up with: Until they came up with this new method, Session …

… bacterial species is made of four ecologically distinct groups with different lifestyles. The Science The bacterium … structure of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene … the uncultivated SAR324. The constellation of data gave the team unprecedented resolution to study the network of genes …

… diversity, and how sequencing and bioinformatics have sped up the study of giant viruses. The Impact In their existence … the diversity of the  Nucleocytoviricota phylum. As a group, giant viruses infect a wide array of microeukaryotes, … for giant virus genomic discovery.  In 2020, a JGI-led team used this approach to deliver novel viral genomes from …

… To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an …

… methods are bringing this mobilome into light, and opening up new options for engineering these microbes in the future. …