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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library approach to tuning gene expression in metabolic pathways. Compared to the … Foundation, and the JGI Synthesis Program under FP00005685. In addition, M.D. acknowledges funding from a National …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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Decoding Yellowstone’s Microbial Mats
… it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two billion years ago. A team of researchers … Yellowstone National Park to study how cyanobacteria are living, communally, in microbial mats. Along the way, they’ve encountered …
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… practices that support agriculture – such as efficiently using dwindling water resources and restoring and maintaining healthy … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at …
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Busting the Unbreakable Lignin
… of plant components   The Science There are three main ingredients to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and … The authors acknowledge their funding sources: Office of Biological and Environmental Research … of the U.S. Department of Energy grant DE-SC0020420 (MAO), Institute for Collaborative Biotechnologies grants …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… Streamlined genome with precise gene targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based … supported for his work on  Auxenochlorella genome sequencing and assembly in Berkeley, in part, through the Laboratory Directed …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment …
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The Expanding Universe of Methane Metabolisms in Archaea
… Metagenome-assembled archaeal genomes provide new insights into an ancient metabolism. Methane is a greenhouse gas 20 … than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key role in determining the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over the … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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