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A call for standardized classification of metagenome projects
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Polar Phytoplankton Need Zinc to Cope with the Cold
… the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they published the first genome … essential nutrients, too.  This work is part of a long-term collaboration with the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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JGI at the AGU Fall Meeting
… (all times in PST unless otherwise noted): December 7   9:15am PT (online) Town Hall on the role of user facilities in … research and tips for submitting successful proposals: Collaborate With a U.S. DOE User Facility: Learn About … by Harnessing Multiple Scientific User Facilities in One Proposal via FICUS December 13 8:12 am Convention Center …
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Webinar: SIP technologies at EMSL and JGI
… moving forward with density separation and fraction collection. 4. Q: Are there existing narratives, or plans to … is on the roadmap and will be piloted in the near future. 5. Q: How well-suited is the LA-IRMS for tracking N15? The … 6. Q:How would field applications of the rhizoboxes mentioned in Jim Moran’s presentation work?   A: As long as we …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… kill outright, replicating so thoroughly that they lyse the cell — a process called lytic infection. But some viruses … host indefinitely. Now, in studying a microbial mat from Cone Pool in Mono County, California, scientists have used … an estimated 40 to 80 percent of all the microbial cells on Earth. As microbial predators, viruses are able to …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that … as well as the Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are …
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An Automated Tool for Assessing Virus Data Quality
… on open ocean samples. CheckV identified a total of 44,652 complete or near-complete viral genomes across both … contiguous sequences (contigs) of proviruses flanked on one or both sides by genes from the host organism. With the … the U.S. Department of Energy under contract no. DE-AC02-05CH11231. This work was also supported the grant …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In … journal Nucleic Acids Research , the Secondary Metabolism Collaboratory (SMC) has launched as an interactive public … and viral BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently …
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Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments
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Introducing New Members of the JGI User Executive Committee
… to help develop the JGI’s community outreach efforts with diversity, equity and inclusion in mind. Microbiome … interested in reaching and engaging with new international collaborators and other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s …
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Global Diversity and Biogeography of the Zostera marina Mycobiome
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Genomic diversity within the haloalkaliphilic genus Thioalkalivibrio
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