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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… Variation — From McClintock to Pangenomes Susan Wessler is plant molecular biologist and geneticist and currently a … in computational analysis to identify and characterize TEs, developing software to annotate them in plants other than maize including black cottonwood, rice,  Arabidopsis ,  Mimulus and Amborella (in preparation). …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and BioMart data warehouse … codebase and legacy data resources and hardware, while also developing a modern and maintainable version of Phytozome, …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of … Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … by the JGI in 2009 and it is considered to be a Flagship Plant. By uncovering and characterizing the mechanisms …
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A Sorghum Pangenome Opens More Doors to Discovery
… addition to bolstering sorghum fields, understanding this plant eventually offers avenues for translating its … sequence for a line of sorghum, reference genomes have generated insight into drought tolerance, biomass production … more — however, a single reference genome shows only one slice of the adaptation possible for this plant. In other …
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Genetic Analysis of Physcomitrella patens Identifies ABSCISIC ACID NON-RESPONSIVE, a Regulator of ABA Responses Unique to Basal Land Plants and Required for Desiccation Tolerance
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Fungus Fuels Tree Growth
… organic matter, or as an endophyte, living between a plant’s root cells. The fungus is almost always found among … studied what happens to the tree’s physical traits and gene expression when the fungus is present. The Impact Black … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science …
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Enzymatic Adaptation of Podospora anserina to Different Plant Biomass Provides Leads to Optimized Commercial Enzyme Cocktails
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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens
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Phylogenomic Analyses Indicate that Early Fungi Evolved Digesting Cell Walls of Algal Ancestors of Land Plants
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Population Level Analysis of Evolved Mutations Underlying Improvements in Plant Hemicellulose and Cellulose Fermentation by Clostridium phytofermentans
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Potential Biocontrol Activities of Populus Endophytes against Several Plant Pathogens Using Different Inhibitory Mechanisms
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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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