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Biotech Partners Summer Intern Co-Authors NAR Paper
… Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine … in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed and assigned … in GOLD. “Besides these, he curated several small sets of phylogeny, biosample metadata tasks we assigned.”   …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… Ray and it has been especially called on in the move to the new building where that was really critical. It takes a … Ray oversaw the acquisition and renovation of Building 310, adding the crowning piece of the entire 80,000 square … of them on a daily basis.” In retirement Ray hopes to spend quality time with friends and family, golfing, traveling a …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate … size of the United States began forming in Alaska. Over the next two years it slowly spread, raising water temperatures … which go from coastal to open ocean waters. Between 2010 and 2016, Hallam and his colleagues collected more than …
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New Biological Insights Into How Deforestation in Amazonia Affects Soil Microbial Communities Using Metagenomics and Metagenome-Assembled Genomes
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The genome of Syntrophorhabdus aromaticivorans strain UI provides new insights for syntrophic aromatic compound metabolism and electron flow
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Sequence-based bioprospecting of myo-inositol oxygenase (Miox) reveals new homologues that increase glucaric acid production in Saccharomyces cerevisiae
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Nitrogen fixation in Pampinifervens, a new species-rich genus of Aquificaceae that inhabits a wide pH range in terrestrial hot springs
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The Case for Conservation
… is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female … HudsonAlpha Institute for Biotechnology, reported that high quality genome references are now available for male and … each moss genome, and are almost four times the size of the next largest chromosome. As the study first author Carey put …
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Effects of Polar Light Cycle on Microbial Food Web
… evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … was separated from the Southern Ocean roughly 5-7,000 years ago and has been well-studied by many researchers for … cycles. Water samples from Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A …
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An Earth Month Look at Sustainability Efforts at the JGI
… of Earth Month events throughout April. This year, a new group at the Lab, the Sustainable Garden Club, hosted a … of a partnership with Sustainable Berkeley Lab, building on years of collaboration on sustainability efforts within the … laid in Walnut Creek before people moved into the new building,” Fulton said. For example, even before moving …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… Ocean Sciences described a novel technique to access high-quality genomic information using minute quantities of DNA … and uncultured in laboratories. Other firsts followed. The next year, the JGI team reported the first closed and … lineages from a variety of environments. In 2017, the first New Lineages of Life (NeLLi) workshop was held, inviting the …
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What Happens Underground Influences Global Nutrient Cycles
… genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in Chlamy, as the alga is … Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field campaign taking place … drought and multi-isotope labeling experiment, and the data will allow them to better understand the impacts of …
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