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… and other microorganisms that live there.  Researchers from Portland State University and the University of … study as well as  genome analysis, providing authors a more complete picture of the taxonomic composition and metabolic … datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study,  published …

… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early …

… and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched … et al (2014) MycoCosm portal: gearing up for 1000 fungal genomes.  Nucleic Acids Res. 42(1):D699-704. Read B et al. …

… to technical limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification … allow simultaneous measurement of multiple samples in a single experiment — and integrated these data with … applications. “We worked with 10 species ranging from grasses to broccoli and trees like poplar, spanning …

… uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover … specific metabolic processes. A third approach steps away from reconstructing genomes directly from the environment and focuses on …

… guest piece, postdoctoral researcher Joseph Napier from the Juenger lab and computational biologist Paul … by the number of 8X individuals that had been collected from field work. When viewing the full distribution of … of naturally-occurring genotypes (in this case, a plant’s complete genetic makeup) and 10 common gardens. We …