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JGI@25: Fueling Investigation into Methane-Making Microbes
… In honor of the JGI's 25th anniversary in 2022, we have … the atmosphere as much as 25 times more quickly than even carbon dioxide. The EPA attributes one-fifth of all methane … of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen …
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Better Genome Editing for Bioenergy
… part of CRISPR-Cas9 technology to enable improvements in microbial oil production. The Science CRISPR-Cas9 is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for … To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a … Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription factors that … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase …
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An Earth Month Look at Sustainability Efforts at the JGI
… Sustainable Berkeley Lab maintains a  calendar of Earth Month … Fulton said. These emissions come from the whole lifecycle of materials used — from their creation to their … To minimize emissions from the disposal end of that lifecycle, there’s a specific push going on at the JGI — the …
Learn more
Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of … the DOE aims to advance genome science-based scientific research from a broad range of disciplines. Three calls fall under the umbrella of our CSP: The …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions … and untargeted approaches. The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , … typically use a measure of biomass, e.g. wet weight, total carbon analysis of the biomass, etc. Q:  If we have only the …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a … Soil microorganisms play a critical role in sequestering carbon and mitigating greenhouse gas emissions, and …
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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data quality. The Science Through advances in sequencing technologies and computational approaches, … microbes that play key roles in cycling nutrients such as carbon, nitrogen and sulfur are themselves regulated by …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic biogeography. The Science Haloarchaea flourish in hypersaline environments, and researchers are interested in learning how these microbes have … microbial communities contribute to global biogeochemical cycles, and possibly cold-temperature enzymes for …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … microbial metabolism affects the biogeochemical cycling of carbon, nitrogen, and other elements, better understanding … sequencing. A team co-led by Mária Džunková, postdoctoral researcher at the U.S. Department of Energy (DOE) Joint Genome …
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… This year’s list features 6,900 researchers working in 21 fields.  Congratulations to the  … Group helped better-understand what the sulfur-oxidizing, carbon fixing bacterium was doing in the Guadeloupean … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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