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Open Frameworks Training the Next Generation of Scientists
… participants. Over the past two years, Myco-Ed has been used in 15 individual classrooms across the country, … DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, and the DOE Systems Biology Knowledgebase … a key problem to solve because fungi are very diverse organisms with potential biotechnology applications in a range of …
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First Monoploid Reference Sequence of Sugarcane
… difficult to sequence and assemble, in turn limiting the use of modern, genomic breeding in these crops. For diploid species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to … successfully assembled a first monoploid reference sequence using a targeted approach that focused on the gene rich part …
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JGI Early Career Researchers Featured in mSystems Special Issue
… method of traditional shotgun metagenomics. One approach uses fluorescence-activated cell sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The … a recent Nature Communications paper, uncovering giant virus sequences in soil for the first time. A second approach …
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JGI Earth Month: Kjiersten Fagnan Reflects on Shelter-in-Place Effects
… of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… Program presents… Eyes on the Prize – Launching & Sustaining Startups in Synthetic Biology Who’s Invited? All Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A followed by: 4:15 pm – 5:30 pm: Hosted Hoppy …
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A Step Toward Controlling Soybean Rust
… is the world’s leading soybean producer , and soybeans are used to produce biodiesel. The fungus  Phakopsora pachyrhizi causes Asian Soybean Rust (ASR) and is the major pathogen of … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Webinar: Introducing the BioSANS capability
… is at the Center for Structural Molecular Biology (CSMB) at Oak Ridge National Laboratory.   On March 2, 2021, … instrument when applying to the FY2022 EMSL-JGI FICUS call for proposals. Presentations from: Scott Lea, EMSL’s … “Solar Energy Conversion in Cyanobacterial Membranes” Marcus Foston, Washington University in St. Louis on “Integrated …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA … requires ~ 1.5-10 ㎍. Low-input protocols are continuously improved, but currently require input in the ~ 30 – … use the ‘Base Modification Analysis’ tool within PacBio SMRT link, which works well for 6mA and 4mC (~50x depth), …
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Promoting the Power of Viral Metagenomics
… have been forced to confront the awesome power that viruses have to affect nearly every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than humans, like bacteria, this power is … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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Styling for Safety: PPE, It’s the JGI Way
… is worn to minimize exposure to hazards that can cause workplace injuries and illnesses.  PPE or Personal … is worn to minimize exposure to hazards that can cause workplace injuries and illnesses. These injuries and … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National …
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