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New and Improved: Eucalyptus Reference is Now Accessible
… Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | … , with significant advances compared to the 2014 Eucalyptus grandis reference genome that has been widely adopted. … assembly generated through the JGI’s Community Science Program will help support targeted genetic breeding of …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) … leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … most of the known RNA viruses have been associated with eukaryotes. Along with the expansion of bacteria-associated … team, the computational work that led to the uncovered abundance of RNA viruses is just the beginning. “I often say …
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Methanogens implicated by DNA evidence
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Building Wet and Dry Lab Skills
… funded by a DOE training grant.  Building off the previous year’s project, undergraduate interns Tamyra Long and … affect microbiome composition and plant growth. Under the supervision of their mentors, they were responsible for all … the Oakland soccer club this summer.  Want to learn more about their experience? Watch the short video below:  Video …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … he added. Jeremy Schmutz , head of the  JGI Plant Program , drew parallels between these  common gardens and …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual …
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Extracting the Secrets of Secondary Metabolites
… combo helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those … paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is … and other industries — yet there’s still so much about them we don’t know.  Unlocking the power of secondary …
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The More the Merrier: Making the Case for Plant Pan-genomes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the study, partly enabled by the JGI’s  Community Science Program , the team generated reference genomes for  B. … (China); Universidad de Zaragoza-Escuela Politécnica Superior de Huesca (Spain); Universidad Central de Venezuela …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … information as well as of important descriptive metadata about each strain. “This has been a very fruitful …
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Chomping Toward Better Plastic Recycling
… We know all kinds of things about plastic – except, how to break it down for recycling. …
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j5 DNA Assembly Design Automation
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