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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges.   … translates to “plant destroyer” and it has served as just that on a catastrophic scale from Baja California north into …
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Understanding Wildfire Recovery, Starting in Soil
… forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the … can transplant trees and soils, targeting helpful bacteria, viruses and fungi. Overall, better understanding of a … messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses survive. With …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… the essential trace metal zinc, compared to other oceans. That zinc turns out to be extremely important for polar … of these microalgae interact, researchers have found that polar algae rely on dissolved zinc to photosynthesize. … microalga: the diatom Fragilariopsis cylindrus . At that time, they noted that the F. cylindrus genome encoded …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… in plants. To better pinpoint the biosynthetic routes that produce terpenes, the JGI synthesized several of the … underlying genes. These genes then provided a foundation that allowed the scientists to interrogate the roles that terpenes play in nature. The research collaboration has …
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JGI at the AGU Fall Meeting
… State University (short talk): “Predators of the Deep: virus-host dynamics in the terrestrial subsurface” 2pm …
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Leo Baumgart
… He developed and scaled the multiDAP-seq assay, a method that enables high-throughput characterization of …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… from the School of Natural Sciences and started a program that offered a handful of graduate students summer research … workforce and our diverse collaborators around the world. That said, we recognize that workforce in genomics, including JGI, is not …
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JGI-UC Merced Interns Share Their 2021 Experiences
… Cataloging Lineage Specific Conserved Genes in Giant Viruses …
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Fishing for Novel Cellulose Degraders
… are present in any given ecosystem—particularly those that are in low abundances—and their functional roles in … researchers developed a function-driven, single-cell screen that they described as a “bait and hook” approach to isolate … microbes to fluorescently labeled cellulose particles that served as the “bait,” and then they isolated the …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … microbes and their enzymes are an optimal study subject that could lead to more sustainable energy production.  …
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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… of bacteria and interacts with cell signaling networks that control many basic cellular functions. It plays an … is a key player in the intracellular signaling network that drives bacterial colonization and motility. By building … Facility, built a chemiluminescent cyclic di-GMP biosensor that can produce both large signal changes and high signal …
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Scaling Up Existing Skill Sets
… to gain experience in a non-academic research environment that is also distinct from private industry. I really liked … rewarding challenges. Also, my work touched on phenomena that were outside of the area of focus of most of the rest … JGI summer internship opened the door for me in the sense that I learned many different tools in bioinformatics …
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