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… studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … interpret different light cues by altering their growth program, and on how plants coordinate their gene expression … of the Index of Cell Identity as an R package … Education … Selected Publications … Software …

Over the years, hundreds of interns have come to the JGI from all parts of the globe to gain lab experience and contribute to ongoing projects. …

Kanwar spends part of his time assisting JGI users by processing their single cell samples using our …

In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about … Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …

Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … improving their abilities to adapt to extreme environments such as poor soils and drought. The reference genome for  M. … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

Stable Isotope Probing (SIP) is a powerful technique for studying … catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible … make this technique, SIP, more standardized -- more reproducible, more reusable, and more insightful, for the future …

Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A … improving their abilities to adapt to extreme environments such as poor soils and drought. The reference genome for M. … Biosciences Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… bee gut microbes have a division of labor when it comes to metabolizing complex polysaccharides. Honey bees are … enzymes. Honey bees rely on their gut microbiota to produce these enzymes to break down polysaccharides. But … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …

Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … and as a feedstock for biomass-based biofuel production. As seen with many commonly cultivated commercial …

My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …