Results

High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
Learn more
Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
Learn more
Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
Learn more
Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
Learn more
Doubling Down on Known Protein Families
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (IMG/M) database, they successfully crafted the Novel Metagenome Protein Families (NMPF) Catalog.  “We can now … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
Learn more
Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
Learn more
The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
Learn more
Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after a … helped fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
Learn more
Cataloging the Microbes that Manage the Health of River Systems
… systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing protocols … were also funded under the RC-SFA at PNNL by DOE BER ESS. Metagenomic and metatranscriptomic sequencing was performed at …
Learn more
Here, There and Everywhere: Large and Giant Viruses Abound Globally
… JGI-led team significantly expands the global diversity of … Program . The team mined more than 8,500 publicly available metagenome datasets generated from sampling sites around the … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
Learn more
New Vision, New Mission, New Plan: The JGI’s Next Five Years
… New 5-year strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released its newest 5-Year Strategic Plan: … requires a deep understanding of biological systems. The JGI strategic plan lays out how users and the global …
Learn more
A Community Resource for Secondary Metabolite Researchers
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and secondary metabolites information from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed …
Learn more