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… developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on … improving the interpretation of microbial, metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one …

Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, … analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program … Nat Biotechnol. 2011; 29: 922-927. Eastwood DC et al. The plant cell wall-decomposing machinery underlies the …

… with a zinc-mirror heme site ties heme availability to carbon metabolism in cyanobacteria Nature Communications 15(1) … 2024 Simirenko et al ., gRNA-SeqRET: a universal tool for targeted and genome-scale gRNA design and sequence … Exploiting algal NADPH oxidase for biophotovoltaic energy. Plant biotechnology journal . 14: 1, 22-28. 2016 Blaby et. …

… for the production of  clean energy . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial relationships …

… to the DOE mission, switchgrass is among the JGI Flagship Plants . Since 2007, the JGI has been working on identifying … The switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data … in biomass-based fuels.   … P. virgatum on Phytozome … Plant Dataset …

Ben Cole on a project involving bacteria in Arabidopsis plant roots. At the same time, Lawrence worked with Nicole Johnson … developing an algorithm for RNA-Seq assembly. RNA-Seq is a technique for profiling the small fraction of a genome that …

… learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and theory. Being able to work with state of the … for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : “Being a JGI intern …

… little water, full sunlight and hot temperatures, sorghum plants can photosynthesize and thrive — some varieties grow … which is the fastest way for plants to convert carbon dioxide and water into sugars and oxygen. Both … looks at how each variety stores sugars and sequesters carbon. 2015: Epigenetic Control of Drought Tolerance in …

… floor fungi. Allison Joy looks into seagrass meadows' carbon sequestration with insights from Adam Healey and Xiao … on the symbiotic relationship between mycorrhizal fungi and plant roots.  …