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A One-Stop Shop for Analyzing Algal Genomes
… with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many components that …
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Rex Malmstrom
… of the Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ … that require fluorescence activated cell sorting and non-standard molecular protocols.  Finally, his team utilizes … Nature Comm 10(1) 1-10 Schulz, F. et al. 2018. Hidden diversity of soil giant viruses. Nature Comm . 9 (1), 4881 …
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CSP Functional Genomics
… function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance … without the capabilities and expertise available at the JGI. Proposals to this call may be submitted to the JGI at any time using a simple web-based form and are …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… for multiple applications The planet’s microbial diversity is immense, yet much of it remains unknown. For … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … fill in the gaps,” she added. DSMZ not only preserves a standardized culture collection of international renown, …
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Informatics Advisory Committee
The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to the JGI Director. The IAC is chartered to render advice, … the effective management and strategic objectives for the JGI’s data science, informatics and information technology …
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Game On: High School Students Drive Everglades Metagenomics Study
In late June, Kathleen Lail, a member of JGI’s Sample Management Group, attended a conference in … They chose this location because much is unknown about the diversity of organisms (taxonomy) and particularly those in … class understood that much is unknown about the taxonomic diversity and methane metabolism within the Florida …
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A Natural Mechanism Can Turbocharge Viral Evolution
… of viruses that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … surprisingly active. In viruses, DGRs appear to generate diversity quickly, allowing these viruses to target new …
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Synthesis
… assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables users to validate … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program.    Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… recognized Woyke as a pioneer in uncovering the hidden diversity of “microbial dark matter”–that uncultured and … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the American Academy of Microbiology (AAM). She has led JGI’s Microbial Genomics Program since 2009 and heads the …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this … the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … hot springs, an extreme environment with low genetic diversity that would help narrow down potential sources of … with that, we have a much less biased view into biological diversity. You don’t have tunnel vision anymore, only seeing …
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CSP New Investigator Call
… is for investigators and research initiatives new to the JGI. Projects must be independent of ongoing JGI proposals, and lead PIs cannot have been lead PI on any previously accepted JGI CSP or FICUS proposal.   Competitive projects will …
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