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An orphan gene BOOSTER enhances photosynthetic efficiency and plant productivity
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Recruitment, rewiring and deep conservation in flowering plant gene regulation
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EcoBOT: an AI/ML enabled automated phenotyping capability for model plants
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Open Frameworks Training the Next Generation of Scientists
… contributions—including sequencing services and analysis—to participants. Over the past two years, Myco-Ed has been … while curating reusable microbiome data. Undergraduate educators are partnering with the JGI and KBase to tap into their … genomes, but unfortunately there are not many available to study. This is because most fungal clades have no reference …
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Getting back to the grass roots: harnessing specialized metabolites for improved crop stress resilience
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Forming Scientific Connections and Building Community
… learned so much in terms of scientific approach and as a plant biologist, I have learned so many techniques and … work with state of the art technology and greenhouses/grow chambers has been an incredible experience. I feel like a … integration system for the selection of genes essential for specialized carbon utilization ” Jesica Calderon : “Being a …
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for users to more … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for example, crop and … biologist at HudsonAlpha and first author of the study. “For that, it’s necessary to have the plant’s genome … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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From Competition to Cooperation
… 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been done … evolved to establish symbiotic relationships with plants (mycorrhizae), and particularly how fungi that feed … (Berkeley Lab). All of the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … regulation is critical to ensuring genes vital for growth and survival across various environments are … given sigma factor are inferred. Prior to this most recent study, only 12 sigma factors and 200 genes (or 209 sigma …
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Intraspecific comparison and annotation of two complete mitochondrial genome sequences from the plant pathogenic fungus Mycosphaerella graminicola
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Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta
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