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Better Living Through Bioenergy
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Expanding Virophage Diversity
… & Microbiomes (IMG/M) data suite—which includes  IMG/VR (for Virus)—for the virophage marker gene MCP, they were able to … plant rhizosphere, wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 … address some of the most pressing challenges of our time. For more information, please visit  …
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2025 Progress Report
… demonstrate how their laboratory and data science efforts support users, advance foundational science and enable …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… involved? How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics … data (secondary metabolomics), how can we map it into these networks? A: We use networks based on the fragmentation spectra of the … address some of the most pressing challenges of our time. For more information, please visit  …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based biofuel production. As seen with many …
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JGI@25: Studying Sorghum’s Survival Skills
… challenges. Sorghum stands out as a candidate feedstock for biofuels thanks to its drought and flood hardiness. Even … feature in common with certain other cereal crops: It performs C4 photosynthesis, which is the fastest way for plants … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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When “The Blob” Made It Hotter Under the Water
… Data from marine heatwave event may foreshadow climate change impact on marine microbial … it in the deep ocean. With genomic samples collected before, during and after The Blob, researchers developed a … Program . The proposal focuses on uncovering the metabolic networks involved in carbon and nutrient flux in marine …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … , a team of researchers likewise honed their tool before felling their research problem: at a genetic level, how … Y. lipolytica work? The project was a multi-institutional effort led by then-graduate student Cory Schwartz and his …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. The planet’s microbial diversity … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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How Maize Makes An Antibiotic Cocktail
… revealed that just a handful of enzymes are needed to transform zealexins and related precursors into a bonanza of … the protective function of zealexins and related compounds for other plants, including those cultivated for bioenergy. The zealexin synthesis pathway may be …
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Virus-Microbe Interactions of Mud Island Mangroves
… the SCGSR research experience was “an ideal opportunity for me to get real-world experience.” As he finalizes his … as a computational biologist. My primary future goal is to form a startup.” …
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JGI Early Career Researchers Featured in mSystems Special Issue
… sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … paper, uncovering giant virus sequences in soil for the first time. A second approach known as DNA stable … Eloe-Fadrosh’s Environmental Genomics group, makes a pitch for readers to get involved in the developing field of virus …
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