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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … metatranscriptome yet,” said Igor Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved understanding of multiple forest systems, this work sets up protocols and …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … can enable studies of plant root microbiome and other microbiomes by providing reference genomes of the key community participants and enabling future metagenomics studies.   … The sequencing project was funded by the …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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H2-saturation of high affinity H2-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
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Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3
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Partners
… expertise to advance the science and serve as impact multipliers . The JGI has a long-term partnership with the … our Plant Program, and is further leveraging the services of the Arizona Genomics Institute for DNA and RNA extractions to support plant …
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John Vogel
Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research … Department of Plant Biology … Scarlett, et. al. 2023 Multiple origins, one evolutionary trajectory: gradual … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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Diversity and heritability of the maize rhizosphere microbiome under field conditions
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Recruiting Human Microbiome Shotgun Data to Site-Specific Reference Genomes
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IMG/M-HMP: A Metagenome Comparative Analysis System for the Human Microbiome Project
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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