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Persistent memory as an effective alternative to random access memory in metagenome assembly
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NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes
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IMG/PR: a database of plasmids from genomes and metagenomes with rich annotations and metadata
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Individual genome assembly from complex community short-read metagenomic datasets
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Busting the Unbreakable Lignin
New evidence shows anaerobic fungi can degrade the hardiest of plant components   The Science There are three main … tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, cumulatively called … of the types of chemical bonds in plant cell walls, it enabled researchers to identify specific bond-breakages …
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JGI on the 2021 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade.” … 21 fields appear on the list, and those from the JGI whose publications rank in the top 1% by citations for field and …
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Disclaimer
… resides on a computer system funded by the U.S. Department of Energy. Anyone using this system consents to monitoring of this use by system or security personnel. … With respect … neither the United States Government nor the University of California nor any of their employees, makes any …
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave
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The gold-standard genome of Aspergillus niger NRRL 3 enables a detailed view of the diversity of sugar catabolism in fungi
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Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes
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2025 NeLLi Symposium
Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis.  This is a … Olga Zhaxybayeva Dartmouth University … Metagenomic and single-cell sequence data have provided a means to access …
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