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The Joint Genome Institute Offers Resources Beyond a Core Facility
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate … for tuning this symbiosis. “Those are great candidates for genetic engineering. Our hope is that the community at large … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … as a group. Um, during the internship I was able to have code review sessions with a few people in my team, and we …
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science … to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists builds and operates the data and … science.  Dr. Sneddon is an accomplished leader in data, software, compute, and AI for large-scale genomics and lab …
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
Learn more
Natural Prodcast Episode 22: Alison Narayan
… Hey everyone. Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: … Dan and Jackie talk to Alison Narayan , from the University of Michigan’s Life Sciences Institute and Department of …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, has released their 2019 list of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused … Genomics Lead Dan Rokhsar , Molecular Biology & Genetics Staff Data Scientist Asaf Salamov, Plant & Animal …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better understand how beneficial … control over reproduction was a likely key to this evolutionary transition. Using this model, researchers also … the National Science Foundation and the National Institutes of Health. The work conducted by the U.S. Department of …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can …
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Nigel Mouncey
… Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … Dr. Mouncey has a long-standing interest in microbial genetics that started with his education and carried forward …
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