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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life
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Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens
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Visualizing in situ translational activity for identifying and sorting slow-growing archaeal−bacterial consortia
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The … regulation. Focusing on the rhizosphere and interactions between the trees, microbes and soil chemistry offers …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … wild populations is that tests to find associations between genotype – an organism’s genetic makeup – and … on Aging have demonstrated a way to map associations between genotype and phenotype using a strategy called …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. … Axel Visel is the JGI's Deputy for Science Programs. Click to learn more about our seven science program — …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … learning. Vector representations allow homology searches between proteins to become much simpler; instead of aligning … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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A compendium of bacterial and archaeal single-cell amplified genomes from oxygen deficient marine waters
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Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil
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The Mobilome in the Mire
…   For years, researchers have known that many datasets miss a key part of microbial … the mobile genetic elements, or MGEs, that can move between organisms. But now, deep sequencing and new analysis …
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Soil virus offers insight into maintaining microorganisms
… Using the IMG/M data portal, researchers have identified a virus protein tied … chitosanases were distinct from similar proteins found in archaea, fungi or bacteria. Certain similarities with … This work was supported by the Department of Energy (DOE) Office of Biological and …
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Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone
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