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JGI@25: From Life at the Extremes to Editing Genomes
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright AV …
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The JGI Data Portal: Improving User Experience
… around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of … more findable and easier to download is a complex one, so our joint team started small, in the tradition of agile …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … able to assemble ~75% of the Olpidium genome and retrieve ~300 markers for phylogenetic reconstruction . We were also … the much more extensive taxonomic and genetic sampling, our study confirmed the affinity between Olpidium and the …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … in Menlo Park, Calif. In the June 24, 2022, issue of the journal Science, Volland and colleagues, including … fundamental, creative research projects to advance our understanding of the natural world,” added Sara Bender …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… food webs in cold, but fecund polar waters. “A lot of our food comes from the North Atlantic, North Pacific and … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing …
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Wringing everything out with bioprospecting
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Learning to Look
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an algorithm that a … By the numbers, the new approach detected inoviruses in 3,609 (6 percent) of the 56,868 microbial genomes and 2,249 … result of this hidden diversity of inoviruses now overhauls our perception of this virus group – from minor curiosities …
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Crysten Blaby-Haas
… engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with … (2015) where she co-founded and led the Quantitative Plant Science Initiative (2017-2022), a BER Science Focus Area (SFA).  … PhD, Microbiology and Cell Science, University of Florida NIH Postdoctoral Researcher, …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… large and giant. In a recent study  published in the journal  Nature , a team led by researchers at the U.S. … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this …
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JGI@25: The Little Alga That Could
… revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental … a partial sequence of Chlamydomonas reinhardtii in 2003; then in 2007 the full genome was sequenced and published …
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Matt Blow
… provide analysis support and R&D for production and user science. He received his Ph.D. from the Wellcome Trust … Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  … Morphology by Distant-Acting In Vivo Enhancers. Science 3426157. Blow et al 2010. ChIP-Seq identification of …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and … and capabilities we offer JGI users to help advance their science. … a vision for future technical JGI directions for DOE User science. … of Regents Working Group on “NIH Comparative Genomics Resource” 2021-  Co-Chair, “Advances in Genome Biology & …
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