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Potential Biocontrol Activities of Populus Endophytes against Several Plant Pathogens Using Different Inhibitory Mechanisms
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Functional investigation of five R2R3-MYB transcription factors associated with wood development in Eucalyptus using DAP-seq-ML
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a combination of experimental …
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2024 Progress Report
… processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … 11% of the five-year milestones. … Highlights arising from scientific collaborations with our users over the last year … more than doubled the number of known protein families by using AI clustering algorithms to identify billions of …
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Game On: High School Students Drive Everglades Metagenomics Study
… as a class, the students learned about how to write a scientific paper. They wrote, edited, and rewrote a … to the journal  Environmental Microbiome with significant scientific observations for this Everglades area. Their … This was a first of its kind project, but it is a great model of how the JGI can partner and help train the next …
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Fishing for Novel Cellulose Degraders
… at Lawrence Berkeley National Laboratory (Berkeley Lab). Using a single-cell screen, they can now identify microbes … The team first tested the approach on bacterial laboratory models to set a reference for its performance, and then … ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans
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Systematic Identification of Gene Families for Use as “Markers” for Phylogenetic and Phylogeny-Driven Ecological Studies of Bacteria and Archaea and Their Major Subgroups
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Evolutionary Analyses of Gene Expression Divergence in Panicum hallii: Exploring Constitutive and Plastic Responses Using Reciprocal Transplants
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Mapping N-Linked Glycosylation Sites in the Secretome and Whole Cells of Aspergillus niger Using Hydrazide Chemistry and Mass Spectrometry
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How to Target a Microbial Needle within a Community Haystack
… , combines multiple techniques and was demonstrated using a specific group of marine bacteria called “Vis6” that … algal blooms. The workflow starts by tagging specific cells using an approach named hybridization chain reaction … users in order to address pressing energy and environmental scientific challenges. … The work conducted by the U.S. …
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Cultivating Symbiotic Antarctic Microbes
… ecological consequences of microbe-microbe interactions. Using metagenomes recovered directly from environmental … in the Antarctic lakes and offers a genetically-tractable model system that could help researchers better understand … transferring cytoplasmic content to Nanohaloarchaea. Using flow cytometry, the team purified Nha-C cells from the …
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