Results

SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a … mediate Sphagnum peatmoss resilience to warming . New Phytol. 2022 Jun;234(6):2111-2125. doi: …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … in human and other vertebrate genomes. When he joined the JGI, he worked as a project scientist and then as a research … the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for …
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Honey Bee Gut Microbiota Divvy Up Dinner
… in the next generation of flowering vegetation. In return for their services, bees eat plant nectar and pollen. Nectar … carries out its helpful metabolism: who’s responsible for what biochemical processes? Now, an international team … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Genetic Associations in Four Decades of Multienvironment Trials Reveal Agronomic Trait Evolution in Common Bean
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Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels
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Genome sequences of four novel Endozoicomonas strains associated with a tropical octocoral in a long-term aquarium facility.
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the development of new applications utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …
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Effects of Polar Light Cycle on Microbial Food Web
… evolved separately from other similar systems, and offers new clues into a unique environment in the natural world. … occupy more space on Earth than any other ecosystem. Therefore, understanding the microbial activity that dominates … Ace Lake were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, has discovered … production. Building on the framework provided by our new switchgrass manuscript , we plan to use existing data as …
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