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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 … Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing Center (NERSC) …
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A Complex Confection Decoded: Sugarcane Reference Genome
… for the sugarcane cultivar R570 has been  published in  Nature by an international consortium. With the genetic code … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Fungus Fuels Tree Growth
… feedstock.     The Science The fungus  Mortierella elongata enjoys a dual lifestyle; it can thrive in the soil as a saprophyte, living off decaying organic matter, or as an endophyte, living between a plant’s root … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( Learn more about OGG in  this episode of to the JGI podcast Genome Insider . ) Summary A recent paper …
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From Competition to Cooperation
… a broader analysis than had ever been done before to look at how multiple forest fungi have independently evolved to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several …
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Defining a Pan-Genome for Antarctic Archaea
… Antarctic lakes, some of which have salinities 10 times that of seawater. To shed light on the global biogeography in … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his … The genome and metagenome data are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … for computational analysis of the AT enzyme family, the JGI provided DNA synthesis capabilities to enable functional …
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A Natural Mechanism Can Turbocharge Viral Evolution
… this means using proteins on its tail fibers to latch onto a specific target on the microbial cell’s … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … data, approximately half of which was generated by the JGI, to uncover these DGRs. DGRs were found in single …
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Georg Rath
… Mr. Rath has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and …
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Busting the Unbreakable Lignin
… plant for energy: Cellulose, hemicellulose and lignin, cumulatively called lignocellulose, are the primary components of … have some ability to slowly break down lignin (think of a fallen, decomposing tree in the forest). Because oxygen is … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… in Mexico. While conducting early field studies related to her thesis on cone snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the … Associated Microbes and Parasites. Ul-Hasan credits her JGI-UC Merced summer internship for helping lay the …
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