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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … security. In complement to the Community Science Program, JGI researchers drive innovations that cross the boundaries …
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Finding the Fermenters
… Harnessing BER-funded data resources, researchers built an interactive and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ) with a series of large datasets. One test was to predict traits of more than 400 cultured rumen prokaryotes from the  …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating … assessing the distribution of genome-derived functional traits through the soil profile and their relationships with … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The … and dominant populations in oxygen-poor environments without oxygen deep below ground. These archaea fix carbon … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify … at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided by NERSC, another user … Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing Center (NERSC) …
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Partners
… The JGI leverages its existing partnerships and develops others … as impact multipliers . The JGI has a long-term partnership with the HudsonAlpha Institute for Biotechnology for our … and other efforts. The JGI works closely with DOE computational facilities (e.g., the National Energy Research …
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Kjiersten Fagnan
… Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing consultant, after completing a petascale … Kjiersten Fagnan is the JGI's Chief Informatics Officer. Click to learn more about how the JGI … The Chief Informatics Officer provides advice and strategic direction for …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and press a button to build a model from our database of mappings between biochemical reactions and annotations. We …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… With a new methodology, scientists are now getting more … is through a method called Multiple Displacement Amplification, and most genomes that were acquired through it were … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A One-Stop Shop for Analyzing Algal Genomes
… The PhycoCosm data portal allows anyone to freely investigate the genes of … the genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Genome Insider
… Genome Insider podcast brings listeners into the science that the JGI makes possible. Each episode, host Menaka Wilhelm interviews researchers — JGI Users — and dives into their work on all kinds of …
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