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Marine Microbe Contains Multitudes
… lead author Dominique Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab), through the JGI Community Science Program . The metagenomes were also …
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Triggering Morel Fruiting
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … acquired from an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide … uncultivable wild mushrooms, until Ronald D. Ower, a researcher from San Francisco State University, developed a …
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Improving the Cacao Genome and Phytozome
… for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the American … was among the Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell … Woyke, two JGI users were also elected to the AAM: fungal researcher Jason Stajich of the University of California, …
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Streamlining Regulon Identification in Bacteria
… can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and unscalable. To test the efficacy of RIViT-seq, researchers recently characterized 12 sigma factors and were …
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Understanding Wildfire Recovery, Starting in Soil
… clearer picture of how burned ecosystems return to health, researchers have taken a look at microbial genomes across a … To complete this analysis, a multi-institutional team of researchers collected soil samples from a wildfire that … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of … August 6th? All URLs with a domain of  https://phytozome.jgi.doe.gov will be forwarded ( where possible ) to their corresponding pages at  https://phytozome-next.jgi.doe.gov . If a genome from v12 is present in v13, the …
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Fishing for Novel Cellulose Degraders
… specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … from their captured genomes, the team then used DNA synthesis and cloning, followed by protein in vitro expression …
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Mateus Fiamenghi
… Mateus’s research is focusing on the identification and analysis of …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ability to adapt to stress and rapid environmental changes. Researchers were able to identify specific genes that allow … and ability to adapt to changing environmental conditions, researchers can explore how to better manage the growth, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… or C-fern, specifically has been studied in plant research laboratories and plant biology courses across the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … explain the massive size of most fern genomes. A team of researchers put together a chromosomal genome assembly and …
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When “The Blob” Made It Hotter Under the Water
… on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … samples collected before, during and after The Blob, researchers developed a preliminary model of how marine … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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