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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where … and product offerings for JGI users.  Using cutting-edge mass spectrometry-based techniques, the platform delivers rich metabolite … B.S in Biomedical Engineering, Johns Hopkins University; Ph.D. in …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene … The work (proposal: award at  https://doi.org/10.46936/10.25585/60001405 ) …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… A genetic architecture that is characteristic of the sex … markers of sex enables scientists to develop molecular assays that can distinguish males and females even when … of XX. But, like some plant and songbird species, the system in shrub willow is flipped: females are …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… Survey of Setaria's natural diversity reveals seed dispersal in wild … and down the highways of the continental United States, occasionally pulling over to the side of the road to collect … The weedy grass was green millet (Setaria viridis), a small model grass with a short lifecycle that uses a carbon …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by Clarivate Analytics as “true pioneers in their fields over the last decade, … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. Additionally, as part of an …
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Rex Malmstrom
… Dr. Malmstrom is a Staff Scientist and leader of the Microscale … joining the JGI in 2010, he made the first ever measurements of in situ growth rates and carbon consumption of … in the ocean. Later during his postdoctoral work at the Massachusetts Institute of Technology he developed a high …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, he … Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … proposals addressed one of the following focus topic areas: Biofuels and bioproducts, Biogeochemistry, and … Focus Area (SFA), supported by the Terrestrial Ecosystem Science (TES) program within the DOE Office of …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities … of viral diversity and virus-host interactions in microbial systems. Through a 2021 DOE Early Career Research Program, … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life …
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Jeremy Schmutz
… Mr. Schmutz’s involvement with the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the … the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing … Head at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … answer is no. They refer to the infected microbial cells as virocells, a change in name first described in 2011 which … diversity with an aim to improve predictive ecosystems models, University of Michigan’s Melissa Duhaime and The …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… Congratulations to the 2023 Highly Cited Researchers from the JGI … the publication of multiple highly cited papers during the last decade” by Clarivate Analytics. This year’s list … Grigoriev’s recent work includes the discovery of anaerobic fungi’s ability to break down lignin , the hardiest of plant …
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