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An Automated Tool for Assessing Virus Data Quality
… CheckV can help researchers assess virus sequence fragments and data … uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … Biotechnology , a team from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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When “The Blob” Made It Hotter Under the Water
… on marine microbial communities. The Science A team of researchers tracked the impact of a large-scale heatwave … samples were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Oceanographic Research (SCOR), the US Department of Energy (DOE) Joint Genome Institute, an Office of Science User …
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Mining Metagenomes for Cas Proteins
… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … and the Innovative Genomics Institute.  The Science Researchers report the discovery of miniature Clustered … suite of tools managed by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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Fishing for Novel Cellulose Degraders
… specific catches. A similar technique has been developed by researchers led by Tanja Woyke at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … plant genomes. She has appeared on the annual Highly Cited Researchers list assembly by Clarivate Analytics. In 2020, … and the JGI. Building off this work, researchers at three DOE Bioenergy Research Centers (BRCs) have expanded the …
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Counting dots or counting reads? Complementary approaches to estimate virus-to-microbe ratios
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Better Genome Editing for Bioenergy
… To ensure the gene editing tool will make the right cut, researchers created a set of guide RNAs that were effective … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… first time. For years, Elizabeth (Toby) Kellogg and other researchers at the Danforth Plant Science Center (Danforth … for Biotechnology and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and University of California (UC), Merced. What started … Jorge Arroyo , director of UC Merced’s Undergraduate Research Opportunity Center, echoed similar sentiments for …
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A Complex Confection Decoded: Sugarcane Reference Genome
… major crop without a reference quality genome and now crop researchers can work toward advancing sugarcane … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … Development (CIRAD), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… ability to adapt to stress and rapid environmental changes. Researchers were able to identify specific genes that allow … and sequencing from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the …
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