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Genome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotype
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
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What Happens Underground Influences Global Nutrient Cycles
DOE user facilities EMSL and JGI announce FY 2020 collaborative … Through the Facilities Integrating Collaborations for User Science (FICUS) program, two Department of Energy (DOE) … assessing the distribution of genome-derived functional traits through the soil profile and their relationships with …
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JGI Scientists Pen Genome Watch Articles
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequence the human genome. Today, the Sanger Institute focuses on genomics to understand human and pathogen biology. Du Toit invited JGI to write half of the 2019 Genome Watch articles as a way to expose readers to a …
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Pinning Down a Piece of Photosynthesis
… and the fuel for food webs as they turn carbon dioxide and water into oxygen and sugars. How photosynthesis works, … an array of experiments at universities and national user facilities, researchers found that this protein detects … heme site that plays a key role in sensing iron and regulating metabolism as cyanobacteria photosynthesize. This …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… which is how the EPA, it’s one of the indices they use for stream health, they look at how many invertebrate … sustainable through applications of microbiome science; our water quality, our water resource needs are, are tightly coupled to microbiome …
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2024 Progress Report
Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, … in April 2024 — through serving an increased number of users with a record output of products, making data easier to access and use, and by investing in the latest advanced genomic …
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Exploring the Diversity of the American Prairie’s Switchgrass
… made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, etc. — to its …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… unexpected complexity At first glance, the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even lighter … visible to the naked eye. The unusual size is notable because bacteria aren’t usually visible without the assistance …
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Waiting to Respire
… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined … popularizer and communicator (and at one time, the spouse of Lynn Margulis). The information was then used to predict the metabolic strategies applied by a common …
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JGI Portals
… developments to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes … tools for comparative genomics of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to … generated by the JGI and by others. The web portal allows users to navigate these genomes and conduct comparative and …
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A One-Stop Shop for Analyzing Algal Genomes
… the genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and … genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … of eukaryotes (organisms with a nucleus). In part because of this evolutionary diversity, algal genomes can be …
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