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Innovative Technology Improves Our Understanding of Bacterial Cell Signaling
… work enabled by the JGI’s Community Science Program (CSP) . The Impact Cyclic di-GMP controls microbial … work was enabled in part by a proposal to the DNA Synthesis CSP call , and the results are described in ACS Chemical …
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A Natural Mechanism Can Turbocharge Viral Evolution
… ago, a team discovered a group of viruses that had in their genomes a surprising tool: a “diversity generating … these DGRs. DGRs were found in single microbial and viral genomes, as well as genomes sampled all at once from the same environment, … DE-AC02-05CH11231 through the Community Science Program (CSP), the G. Unger Vetlesen and Ambrose Monell Foundations, …
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Ian Blaby
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Learning to Look
… are filamentous viruses with small, single-stranded DNA genomes and a unique chronic infection cycle. “We’re not … affecting the microbe’s own eukaryote host. As their small genomes can be easily manipulated through genetic … tool Roux and his colleagues developed first worked on a reference dataset that included genome sequences known to be …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. …
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Complete Genome Sequence of Rahnella aquatilis CIP 78.65
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of analysis would provide a … of these enzymes across 90 species. They queried the genomes of 15 species from each of six kingdoms: eubacteria, archaea, protist, plant, fungi and animal. This analysis led them to identify 2,938 …
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Meeting Report: “Metagenomics, Metadata and Meta-analysis” (M3) Workshop at the Pacific Symposium on Biocomputing 2010
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Game On: High School Students Drive Everglades Metagenomics Study
… her thoughts about the experience below. In the summer of 2018, Jonathan Benskin was preparing to teach a second year … able to receive training for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… . Susan Wessler , UC Riverside Shaping up conservative genomes Keynote Talk Title: Transposable Element-Mediated … genome sequence, accounting for 45% of the human genome and 50-80% of certain plant genomes including maize, wheat and … work paved the way to move beyond a single case-study, the reference genome, to something that represents all of the …
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Tina Clarke
… committed to enabling conflict resolution with respect and trust. Ms. Clarke is very enthusiastic to be a part of the …
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