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… High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi The Science … stable isotope probing (SIP) proved to vastly reduce labor and improve results. Applying this method to the study … The work conducted by the U.S. Department of Energy Joint Genome Institute ( https://ror.org/04xm1d337 ), a DOE …

… RIViT-seq technology could speed up associating transcription factors with their target genes. The … that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and potential of … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Transcription factors control …

… Developing and validating an integrated approach to genome recovery from … cycling to plant health and growth. Developing a scalable computational approach that provides researchers with … In Nature Microbiology , a team led by longtime JGI collaborator Jill Banfield of the University of California, …

… A preview of how large-scale single cell genomics complements metagenomics studies. The … is a remote hot spring, deep within the British Columbia backcountry (Purcell Wilderness Conservancy Provincial Park … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), employed single-cell sequencing …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to advancing the … 40 years, the International Nucleotide Sequence Database Collaboration (INSDC) has managed the growing corpus of … April 21st, 2021, to solicit additional community feedback on proposed changes to current data policies for …

… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … decades to develop new crops. One example is an ongoing collaborative effort to improve the emerging bioenergy crop … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team … sources, these fungi detect which complex chains are available; this information triggers pathways to determine which … We acknowledge the use of deletion strains generated by Grant P01 GM-068087 “Functional Analysis of …

… 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and capabilities to enable great science that … challenges.   Usually, plants have the upper hand against any kind of biomass breakdown. They’ve spent millions …

… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … Center for Bioenergy Innovation (CBI) at Oak Ridge National Laboratory. To see how the fungus affected poplar growth, … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory …

… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … 2014 to learn more about the microbial responses and feedbacks to warming through the whole soil profile. The goals …

… Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant … was part of the  2018 cohort of the JGI-UC Merced Genomics Internship Program, and is part of  Mark Sistrom’s lab at the UC Merced School of Natural Sciences. The JGI-UC …

… Maize produces a family of compounds that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) … sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program (grant no. 1758976 to E.S. and P.Z.) for diterpenoids, by a DOE Joint Genome Institute Community Science Program (JGI-CSP) …