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… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … mining, empowering research collaborators to take on ambitious synthetic biology experiments. A recent special issue of … Through a series of case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis …

… model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two … for developing methods for converting plant biomass into sustainable fuels for cars and jets. By studying a close … to switchgrass. Summary Rising global temperatures are causing extreme weather events, ranging from prolonged …

… highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often … enzymes, oxidoreductases, and cytochrome P450s. This includes the species L. raphanica, which has been … work (proposal:10.46936/10.25585/60001048) conducted by the US Department of Energy JGI (https://ror.org/04xm1d337), a …

… The Science Chloroplasts are the factories in plant cells. Using photosynthesis, they take raw materials including … from the atmosphere than current natural processes and use it as a sustainable resource for making high-value bioproducts. As a … Council grant (ERC 637675 ‘SYBORG’), as well as the US Department of Energy Joint Genome Institute, a DOE Office …

… microorganisms for biofuel production and other sustainable applications. Summary Hot springs are … A recent study published in  The ISME Journal     focused on a class within  Chloroflexota called  … of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National Laboratory, has …

… yield and climate resilience of algae — for potential use as biomass or in biomass conversion to biofuel. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … also opens new avenues for utilizing these organisms in sustainable practices, such as biofuel production and natural …

… to terrestrial life paves the way for innovations in sustainable agriculture and clean energy. These evolutionary … in marginal lands and with minimal resources. Enabling the use of non-arable land for biomass production — that can be … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … may not seem to amount to much, the common bean (Phaseolus vulgaris) is actually a vital source of protein in many … trait. Traditionally beans have had a shelf-life about roughly 6-9 months before their color begins to …

… of the National Academy of Sciences . The team focused on the dominant bacterial clades shared between honey … pollen’s pectin and hemicellulose are degraded mainly by just two clades:  Gilliamella,  which mostly resides in the bee’s ileum, a structure analogous to the human small intestine; and  Bifidobacterium,  …

… workshop, Volkan Sevim, a computational biologist at the US Department of Energy (DOE) Joint Genome Institute (JGI), … that low sequence identity may belie. The technology he’s using is magical; transform any length of amino acid sequence into a smaller, constant-length vector using deep learning. Vector representations allow homology …

… data policies. Since completion of the HGP, the JGI has sustained its commitment to uploading sequence data generated on behalf of its user community to NCBI as well as to the  data portals that … the ability of the principal investigators of approved JGI user projects to publish the primary report of their data …

… scant, Ace Lake’s bacteria instead go through a boom and bust cycle aligned with light availability. A long-running … Antarctica, was separated from the Southern Ocean roughly 5-7,000 years ago and has been well-studied by many … cycling takes place only on a microbial level. Previous studies focused on the Southern Ocean have found that in …