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Nikos Kyrpides
… Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in … Pavlopoulos GA et al. (2023) Unraveling the functional dark …
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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Three Join the JGI User Executive Committee
… Committee (UEC) recently welcomed three new members earlier this month – Sneha Couvilion of Pacific Northwest … is an Assistant Professor in the Department of Ecology, Evolution and Marine Biology at UCSB, where she leads a … for election to the UEC. Members serve three-year terms and can serve no more than two consecutive terms. At the close …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of … of Earth’s microbial diversity. Because most microbes cannot be cultivated under laboratory conditions, their … most diverse range of samples and environments, including natural and agricultural soils, human- and animal-host …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … fungal endophytes of soybean and how they deter two significant pathogens, the soybean cyst nematode and the soybean … shrub’s presence, researchers hope to learn more about the mechanisms that allow the millet to thrive in drought …
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JGI Early Career Researchers Featured in mSystems Special Issue
… In a special issue of mSystems , out May 14, 2019, JGI … in nature. In the last few years, mapping the planet’s viral diversity has advanced drastically, aided by genome … Roux says, would be the foundation upon which researchers can develop high-throughput and high-resolution studies of …
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Publication Policy
… The purpose of this policy is to establish communication norms around JGI contributions, ensure that all … expect authorship to include all those contributing significantly to the work. The intent of this policy and the lists … JGI Staff: Upon request, JGI staff will provide Users with a list …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a high-throughput AI-centric genomic science user facility …
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Mechanistic insights into consumption of the food additive xanthan gum by the human gut microbiota
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The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa
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