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Dan Rokhsar
… over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics Officer (2013-2016). Dr. Rokhsar … is focused on understanding the origin, evolution, and diversity of plants and animals by combining computational …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … ISBN: 978-3-319-26942-9 Gordon, et. al. 2014 Genome Diversity in Brachypodium distachyon : Deep Sequencing of … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Berkeley National Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this … the JGI Algal Program, which explores genomics of algal diversity and biology to support basic science as well as …
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2024 Progress Report
… (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase … work on four strategic themes: Nutrient Cycling, Functional Diversity, Data and Connectivity and Stewarding Resources. … our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine sequencing, DNA …
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Toward More Efficient Artificial Photosynthesis
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA … for the Future’ Programme, University of Bordeaux Initiative of Excellence (IDEX Bordeaux; …
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first authors Leo Baumgart and …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … hot springs, an extreme environment with low genetic diversity that would help narrow down potential sources of methanogenesis, with metagenomic support from the JGI. First they were able to identify the potential for …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and the data has been …
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Alabama Agricultural & Mechanical University Internship Program
… success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific …
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User Support Analysis Group
… computational analysis for new technology development and JGI user science projects. We perform analysis for diverse …
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A One-Stop Shop for Analyzing Algal Genomes
… with a nucleus). In part because of this evolutionary diversity, algal genomes can be incredibly complex and … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal biology, …
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