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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … allows users to easily compile data that answers what genes are present in which organisms, when are they … genome browser to see their favorite alga’s predicted genes and their organization, and analyze genes in the …
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … allows users to easily compile data that answers what genes are present in which organisms, when are they … genome browser to see their favorite alga’s predicted genes and their organization, and analyze genes in the …
Learn more
Doubling Down on Known Protein Families
… call “known knowns” — that is, they are similar to genes with known function. Others are called ‘known … unknowns’ — that is, they are similar to previously known genes from isolate organisms, but we still aren’t sure of … in the community doesn’t match any of the previously known genes from isolates, there isn’t much scientists can tell …
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How Filamentous Fungi Sense Food
… the activity, expression and regulation of protein-coding genes. This first paper integrating multi-omics data from …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Marianne Buscaglia
… in cold marine environments and is interested in analyzing genes that can impact the metabolism of their hosts. …
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Ancient Algae Reveal Secrets of Plant Evolution
… over 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  … of these algae and land plants. Researchers identified key genes associated with stress responses and compared them … The researchers found that  Zygnematophyceae share key genes with land plants for making and modifying cell walls, …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science … changes. Researchers were able to identify specific genes that allow the algae to adapt to sudden drops in salt … RNA to analyze gene expression, to determine which genes are active under different conditions. This was …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… found a gene likely responsible for sex determination. Many genes differentiate the shrub willow’s sex chromosomes, so the researchers investigated poplar for which genes might be shared in common between poplar’s Y — poplar … in willow. This gene regulates the expression of other genes in response to cytokinin, a key plant hormone, making …
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Extracting the Secrets of Secondary Metabolites
… because it allows researchers to delete or activate certain genes and assess how these edits affect functionality.  … a point of entry. By using CRISPR to knock out or activate genes, researchers at the JGI were able to monitor loss- and … data shows peaks and valleys in secondary metabolites as genes are edited. With the help of CRAGE, the pairing proved …
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Expanding Virophage Diversity
… viruses. Almost all known virophage genomes share only four genes in common: major and minor capsid proteins (MCP and … diverse new virophage genomes containing all four core genes. These virophages were found in diverse habitats …
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Fungus Fuels Tree Growth
… in general; the fungus decreased the expression of poplar genes associated with plant defense (e.g. jasmonic acid and … energy into growth, noting they increased expression of genes involved in signaling of gibberellin, one of the … poplar cuttings had increased expression of lipid signaling genes when they were inoculated with  M. elongata . Poplar …
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