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A One-Stop Shop for Analyzing Algal Genomes
Understanding the genetic underpinnings responsible for these traits takes us closer to harnessing algae for bioenergy and the greater bioeconomy. By bringing … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … which provides a suite of tools to automate sequence design for assembly by Gibson, Yeast recombination and Golden Gate …
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered … establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a research article. Speakers will …
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Alabama A&M Interns Access An Abundance of Knowledge
… an internship program to bring students to the JGI for research training experience. Enabled by the DOE … and I’ll be attending Alabama A&M University this fall for my master’s in plant soil science and my career focus is …
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A Plantiful Future: Xiaohan Yang
… attain a renewable energy future? Can they help lock away more carbon? Xiaohan Yang, a scientist at Oak Ridge …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s … Programs Deputy Axel Visel teamed with University of California (UC), Merced assistant professor Suzanne Sindi from … explained: “One of the hallmarks of JGI is our diverse workforce and our diverse collaborators around the world. That …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene …
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Cultivating Symbiotic Antarctic Microbes
… and the biosphere), including the global carbon cycle. The JGI is sequencing large numbers of microbes and microbial … of an obligate symbiont—entirely dependent on the other for required nutrients—is genome size. The obligate … cells. The most conserved region in the SPEARE proteins appears to be involved in DNA degradation, and these proteins …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. …
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis … the lead of the User Support Analysis group. The group performs custom analysis and develops automated pipelines for … Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. 2022. DNA Methylation in  Ensifer Species during Free-Living …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found in … researchers must examine the interactions that happen between tiny organisms (microbes) located in soils and …
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