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A genomic perspective on fungal diversity and evolution
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The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization
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Genome analysis of the marine bacterium Kiloniella laminariae and first insights into comparative genomics with related Kiloniella species
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The first two chromosome‐scale genome assemblies of American hazelnut enable comparative genomic analysis of the genus Corylus
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A chromosome-level genome assembly of the varied leaved jewelflower, Streptanthus diversifolius, reveals a recent whole genome duplication
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in … determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab …
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The Mobilome in the Mire
… have known that many datasets miss a key part of microbial genomes: the mobile genetic elements, or MGEs, that can move … bringing this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah … Simon Roux (JGI) as they talk about their recent work on a time series from Sweden’s Stordalen Mire. …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring … By tracking gene activity and chemical output over time, the team mapped how the bacterium redirects its … Researchers with the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as … genes has helped pave the way for the conception of a pangenome. Recordings and recaps of all three keynote talks … to know at the beginning of my career, with my postdoctoral project beginning with her strains,” Wessler explained. “She …
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Axel Visel
… Dr. Visel joined the DOE Joint Genome Institute in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
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Identification of novel biomass‐degrading enzymes from genomic dark matter: Populating genomic sequence space with functional annotation
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