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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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The IMG/M data management and analysis system v.7: content updates and new features.
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Statistical analysis of feature-based molecular networking results from non-targeted metabolomics data
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JGI Announces 2025 New Investigator Portfolio
… You, Yong Zhang and Zhiping Zhong. (All images courtesy of the researchers) Each year, the JGI searches for novel … such as metatranscriptomics and environmental DNA sequencing to explore microbial and plant interactions … are accepted year-round for this ongoing call; the next deadline for proposal submission is Sept. 9, 2025, for …
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Four amino acids define the CO2 binding pocket of enoyl-CoA carboxylases/reductases
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … value to the other commonly used culture-independent sequencing approaches including amplicon and metagenomic … of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of …
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Metatranscriptomic Sequencing of Winter and Spring Planktonic Communities from Lake Erie, a Laurentian Great Lake
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, Michael Borg, Rory … Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … are accepted year-round for this ongoing call; the next deadline for proposal submission is Sept. 8, 2026, for …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  … samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the …
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Webinar: SIP technologies at EMSL and JGI
… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … with. 2. Q: What would a typical turnaround time be for data once samples are in hand at JGI? A: It takes a few … go from start to finish, i.e., QC to separation to library sequencing and assembly. Like others, our turnaround time …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal … genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … of fungi, by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes …
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