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Conservation of linkage and evolution of developmental function within the Tbx2/3/4/5 subfamily of T-box genes: implications for the origin of vertebrate limbs
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Annotation of the Corymbia terpene synthase gene family shows broad conservation but dynamic evolution of physical clusters relative to Eucalyptus
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Directed Evolution of Flavin-Dependent Halogenases for Site- and Atroposelective Halogenation of 3‑Aryl-4(3H)‑Quinazolinones via Kinetic or Dynamic Kinetic Resolution
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Waiting to Respire
… Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. More … oxygen as a byproduct. The abundance of oxygen shaped the evolution of life on Earth, and led to the development of … main proponent of the significance of endosymbiosis in evolution of eukaryotes, and Saganbacteria were named for …
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Igor Grigoriev
… at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … of researchers in genome projects and organized numerous genomics workshops. …
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You Can Move, But You Can’t Hide
… to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … like viruses and plasmids drive microbial processes and evolution. This is because MGEs can affect a microbe’s … cycles around them. By understanding more about the genomics of MGEs and their evolution at the cellular level, …
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Fungal Friends or Foes in Plant Roots
… host health. The Science Researchers compared the genomes of fungi that colonize Arabidopsis thaliana roots with … friends or foes. The Impact Microbial communities comprised of fungi and bacteria can thrive in plant roots. They play … of the key community participants and enabling future metagenomics studies.   …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… than 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … around the world. That said, we recognize that workforce in genomics, including JGI, is not representative of the … graduate student summer research experience at the JGI, the Genomics Internship Program expanded to include UC Merced …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … allowed us to pinpoint and rank biologically relevant and evolutionarily conserved genes that could be potential …
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Plastome evolution in annual Brachypodium species reveals widespread heteroplasmy and chloroplast capture, lineage-specific codon usage bias, and low positive selection
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JGI Mural
… The JGI mural on the 3rd floor of the Integrative Genomics Building whimsically references … to advancing the frontiers of environmental and energy genomics. Click on the images below to learn about the …
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … important to understand early life, but also to link the evolution of this metabolism to geochemical data, which in … enzymes.” Gribaldo will be speaking on “Exploration of Metagenomic Data to Understand the Diversity and Evolution of …
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