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Triggering Morel Fruiting
… A collaborative team led by Hao Tan from the Sichuan Academy of … external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information … to an increasingly detailed portrait of molecular features triggering morel fruiting. They include: A diverse …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy … to energy, are made up heavily of sphagnum mosses.  New research identifies sex chromosomes in the plant and … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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2025 NeLLi Symposium
… $250      Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research … of cellular complexity, the tree of life, cultivation of new lineages and the function of candidate lineages in … Symposium, join us for a 1.5–day jamboree on November 6–7 focused on improving cultivation and genomic coverage. …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane Metabolism. Methane-producing archaea … separately. From these samples, 111 metagenome-assembled genomes (MAGs) were recovered, most of them archaea. The … These two things combined led us to conclude that our new methanogen did not belong to the Euryarchaeota, the …
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Evolution of a Fungal Gene Expression Regulator
… the largest analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … of specific 5mC methyltransferase (MTase) variants. Using new sequencing technologies for producing both reference …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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JGI-UC Merced Interns Share Their 2021 Experiences
… 2021, 13 interns from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone science … in their academic career enjoyed the chance to develop new skills needed for their PhD research. And for the first … Evolution of the Mitochondria Internship …
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Katherine Louie
… Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … her team work with other JGI scientists in development of new, advanced mass spectrometry research products such as …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics complements … that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … another might exhibit few limitations to interactions and new connections, thus sharing more ideas, similar to the …
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Eelgrass Proves to Be Much Younger Than We Thought
… has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most … able to spread quickly and establish itself in a variety of new environments.  This all started roughly 250,000 years … scientists had to use the genome itself.   Approximately 67 million years ago, the ancestor to eelgrass underwent a …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, he served as a Research Molecular Biologist at the USDA for 12 … the evolutionary and practical significance of plant pan-genomes including understanding polyploid genome evolution …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … improve our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also …
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