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Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
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Genomic Analysis of Aspergillus Section Terrei Reveals a High Potential in Secondary Metabolite Production and Plant Biomass Degradation
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Applying Viral Genomics Expertise to Understanding the Human Virome
… viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … University. The CODCC aims to coordinate data acquisition, analysis, and visualization through a sustainable, …
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Systems-wide analysis revealed shared and unique responses to moderate and acute high temperatures in the green alga Chlamydomonas reinhardtii
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Ian Blaby
… 2019 Dr. Blaby heads the Biodesign Platform at the Joint Genome Institute, where he leads three groups focused on HTP … strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at …
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Understanding Wildfire Recovery, Starting in Soil
… to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting … a step further, using both DNA and messenger RNA (mRNA) sequencing to identify those traits that have helped fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific attributes — …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … Relevant Links: Publication: Wint R et al. Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals …
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Phylogenetic and Functional Analysis of Metagenome Sequence from High-Temperature Archaeal Habitats Demonstrate Linkages between Metabolic Potential and Geochemistry
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Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… viruses — to support scientists around the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — …
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High‐throughput identification of novel heat tolerance genes via genome‐wide pooled mutant screens in the model green alga Chlamydomonas reinhardtii
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A data analysis and coordination center for the human microbiome project
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