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Tracing the Evolution of Shiitake Mushrooms
… fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and … samples, this study also tracks the enzymes these fungi use to break down wood, and compares genetic diversity between … in the global  carbon cycle . As decayers, Lentinula fungi access carbon previously locked away in wood, converting it …
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Fungal Friends or Foes in Plant Roots
… boost yields for both food and for candidate bioenergy feedstock crops. Summary A plant is like an office building, its roots are akin to the ground floor lobby. People walking into the lobby … isolates from the collection. The team then compared this dataset against nearly 80 previously published fungal …
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Annual Meeting 2027
… details become available. Sign up for our newsletter to receive updates.    …
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Understanding Wildfire Recovery, Starting in Soil
… and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes within the soil. To get a clearer picture of how burned ecosystems return to … — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major strength of this kind of …
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Tanja Woyke Elected to American Academy of Microbiology
… Congratulations to the JGI’s Tanja Woyke , who has been elected to the … focuses on developing and harnessing single-cell methods to access the genetic material of uncultivated microbes and … of Dr. Woyke’s caliber support the JGI User community in accessing our resources and help them to push the boundaries …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from … on Earth. One of the questions is how Marsarchaeota can access oxygen in low-oxygen habitats such as these microbial …
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User Advisory Committees
… of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core … the relationships we nurture in our workplace and seek to establish with our stakeholders. The guiding principles … and the annual meeting. The UEC also acts as a liaison to the user community and the broader scientific community, …
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Atif Shahab
… platform for tracking JGI's sequencing projects and data warehousing. This platform streamlines project management, laboratory information tracking, and enables efficient analysis … their status. Mr. Shahab has extensive experience in Laboratory Information Management Systems (LIMS), bioinformatics, …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the earth, but most species do not grow easily in the lab. To access the genomes of uncultured  microbes , scientists … capability that is desirable in the microbiome field due to its high recovery of single-cell genomes. This is key to … for this work by a Chan Zuckerberg Biohub Investigator Award, NIH Director’s New Innovator Award …
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University of California, Merced Internship Program
… at the JGI, the Genomics Internship Program soon expanded to include undergraduate students. To date, more than 90 UC Merced students have contributed to the research of numerous JGI scientists. Interns say …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … include the development of novel computational tools to identify virus sequences, the design of new … host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts …
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Engagement Webinar: How to Successfully Apply for a CSP Proposal
… Program (CSP) Applications Webinar inviting researchers to submit white papers to the CSP  New Investigator call for proposals.  Tips: … to make sure the goals, experimental design, and plan for data utilization are clear. Contact JGI staff for feedback … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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