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… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … making curated microbiome metadata that follows community standards freely available, and enabling large-scale … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

… they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …

… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … to vastly reduce labor and improve results. Applying this method to the study of a particular fungi, researchers …

… Sorghum genome serves as a reference for the highly complex sugarcane genome . The Science Most species are diploids and have … production from sugarcane. Improving sugarcane breeding methods using molecular biology techniques has been hampered … was supported by the International Consortium for Sugarcane Biotechnology, as well as the South Green Bioinformatics …

… Machine learning approach significantly expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of distinguishing features. Several characters … genomes. “These genomes are so special, regular search methods don’t work,” said Roux. “The machine learning …

… compounds shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … U.S. Department of Energy Joint Genome Institute (https:// …

… Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple applications. … advances in sequencing technologies and computational methods in the past decade, researchers have uncovered … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …

… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office …

… archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a … microbial mats at Yellowstone offer researchers an analog for studying early Earth conditions. Additionally, … analyses, transcriptomics for microbial genomic activity (gene expression), and direct microscopy. Through …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data ecosystem.  A data … biology. The collaborations present exciting possibilities for scientific exploration, granting access to diverse … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has …