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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… Meta-omics datasets show that CRISPR-Cas systems determine mutualism or … interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers used population genomics to find that while archaeal hitchhikers may often …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… Trained on environmental data, a new JGI tool more accurately facilitates … genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … employs artificial intelligence for cutting-edge genomic research — and is capable of discovering and …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… Proposals aim to sequence and annotate genomes from Antarctica to … transformations.” The JGI’s large-scale call included algal genomics as a focus area, and one of the accepted proposals … toward generating “with unprecedented precision” the gene functional networks and regulatory networks of a single …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Protein annotations provide insights into environmental tendencies … from their studied system results in seeing their predicted functional and metabolic roles across global metagenomes … constraints, etc. of natural environments shape specific genomic signatures that could be used to hypothesize …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … fluctuating environmental conditions. The team aims to functionally link gene families to photosynthesis and … omics and computational resources with JGI’s cutting-edge genomics, DNA synthesis and complementary capabilities. …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They are among those recognized by … of a team that  released a reference genome sequence and genomic toolkit for the perennial grass  Miscanthus sinensis … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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DAS Tool for Genome Reconstruction from Metagenomes
… Developing and validating an integrated approach to genome recovery from … changes. Summary Researchers have been utilizing metagenomics as a way to study a collection of hard-to-culture … complexity. The environmental datasets included metagenomic data from Crystal Geyser in Utah (work also done by …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil … with previous studies in the same system. With the right functional characterization, those genes could become dials … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Microbial Genomics & Metagenomics (MGM) Workshop
… Registration has closed.  The U.S. Department of Energy (DOE) Joint Genome … (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on …
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Tour the IGB
… Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. … to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, …
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Annual Genomics of Energy & Environment Meeting
… Thank you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The JGI convenes …
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University of California, Merced Internship Program
… Originally conceived as a UC Merced graduate student summer research experience at the JGI, the Genomics Internship Program soon expanded to include …   Revisit past projects …
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