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JGI@25: Fueling Investigation into Methane-Making Microbes
… as well as efficient engineering of biofuels. Since 2010, the JGI has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community Science Program proposal that … researchers put together what they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project …
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Gut Fungi: Unexpected Source of Novel Chemicals
… californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department … Research and operated under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). CLS is also … The authors acknowledge support from the Center for Scientific Computing from the CNSI, MRL: an NSF MRSEC …
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Building Sphagnum Genomic Resources
… U.S. Department of Energy under Contract No. DE-AC02-05CH11231. For the sphagnome project, germplasm establishment and …
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A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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A Social Science Experience
… 2017 Summer Interns Share Highlights of their time at the JGI …
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JGI & KBase at PAG XXVII
… Animal Genome XXVII Conference (PAG) takes place January 12-16, 2019, in San Diego, Calif. Representatives from the DOE Joint …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between … Berkeley National Laboratory (Berkeley Lab) sequenced 1 trillion bases — a terabase — of soil RNA for this … Science Program proposal that Martin submitted in 2012. At that time, the field had surveyed many different soil …
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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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Marine Microbe Contains Multitudes
… Boeuf and colleagues set sail on research cruises in 2015 and 2016. At Station ALOHA , site of the 30-years-long Hawaii … they have used the sequence of a “marker gene,” namely the 16S ribosomal RNA (rRNA) gene, to mark or identify microbial … was supported by grants from the Simons Foundation (#329108 and #721223 to EFD) and Gordon and Betty Moore …
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Team Science Reveals Important Protein in Poplar
… (BNL) led a team that  identified a protein , PtrbHLH011, within poplar involved in plant growth, lignin … as nutrient-poor land, drought and disease.  Summary In the 1970s, the DOE  targeted poplar as its primary wood crop for … Laboratory (BNL). The Fe deprivation RNA-seq (proposal:  10.46936/10.25585/60001386 ) was conducted by the U.S. …
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Waiting to Respire
… to gain and harness energy. As reported January 28, 2019 in Nature Communications , two research teams joined … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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