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Identifying the Microbial Cleanup Crew at a Superfund Site
… site. The chemical PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from … the city of Española, the Santa Clara Pueblo and its nearby rural populations rely heavily on groundwater as …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and their hitchhikers. The Science Within the archaeal domain, there is a group of tiny …
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JGI User Executive Committee Expands
Six new members have been elected to the User Executive Committee … (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They … National Laboratory, Rebecca Smith of the University of Wisconsin, Maggie Sogin of the University of California, …
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Extracting the Secrets of Secondary Metabolites
… secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of microorganisms live among viruses that infect them. But what trends govern those virus-host interactions? Do … tend to specialize, infecting just a single host? Another wrinkle in the mystery is that viruses can affect their prey in different ways. They have the capacity to kill outright, replicating …
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JGI@25: Studying Sorghum’s Survival Skills
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Sorghum …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
UC Merced undergraduate and graduate students share how their summer internship experiences have influenced their careers in science. Hear more about what they learned from working with their JGI mentors, what … and mentor Robert M. Bowers Nathaniel Brown and mentor Frederik Schulz Daravuth Cheam and mentors Clement Coclet …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… have discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range. But at what cost?  A collaborative team led by researchers at the … has discovered that the candidate bioenergy feedstock switchgrass has adapted to expand its habitat range, but at …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in Tennessee — the birds are … Genome Institute (JGI)-UC Merced internship program, Lawrence is now a postdoctoral researcher at the Oak Ridge …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … concerns about the pathogen to an all-time high. California homeowners witnessed how their once stout oaks, the anchors … techniques were also instrumental in tracing the genetic signature of the organism back to commercial nursery plants in …
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A Collaboration to Improve Plant Genome Annotations Across Species
… plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which … network analysis, and ortholog function descriptions from nearest phylogenetic neighbors. Our pipeline allowed us to …
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Green Algae Reveal One mRNA Encodes Many Proteins
Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene makes messenger RNA, which encodes a single protein. Gene expression in eukaryotes was long held to be monocistronic – that is, a single gene …
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