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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, …
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The Expanding Universe of Methane Metabolisms in Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome … that methanogenesis is one of the oldest metabolisms, with the first traces possibly at ~3.5 Gy (billion years),” …
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Boosting Small Molecule Production in Super “Soup”
… (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have both the machinery to make … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … at Warp Drive Bio, and as a bioinformatics HPC consultant with NERSC. Dr. Udwary co-hosts JGI’s "Natural Prodcast" … chat"-style podcast about natural products and the science and scientists of secondary metabolism. … PhD in …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… a decade, researchers around the world have collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a … Olpidium attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor …
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“A STEM career is in reach and accessible”
Interns from Antioch High School. Though a partnership with Biotech Partners, a nonprofit that provides underserved … participation in higher education and access to fulfilling science careers, JGI hosted five students from Antioch High School this …
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I-Min (Amy) Chen
Dr. I-Min A. Chen received her Ph.D. in Computer Science. Her research has been focused on semantic and … currently the Microbiome Computational Resource Lead at the JGI, responsible for the data management infrastructure of … IMG/VR v4: an expanded database of uncultured virus genomes within a framework of extensive functional, taxonomic, and …
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