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A Collaboration to Improve Plant Genome Annotations Across Species
… improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … the JGI Plant Gene Atlas in  Nucleic Acids Research . The project spans 15 years and involves more than 17 research … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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Toward More Efficient Artificial Photosynthesis
… and utilize carbon in a synthetic fixation cycle. The Science Chloroplasts are the factories in plant cells. Using … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …
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How to Target a Microbial Needle within a Community Haystack
… microbes from complex environmental samples. The Science A team led by researchers at the Max Planck … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps researchers develop technology that can then be …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … ( The annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds …
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Webinar: PhycoCosm Tutorial
… Learn more about JGI’s  PhycoCosm data portal , an interactive collection of … the resources for free. 8.  Q: What makes a successful project? A: Combination of: DOE mission relevance Science User community – trying to produce resources for … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Gene Expression: From On-Off Switch to Dial
… gene expression helps identify variants in yeast genes. The Science Scientists have developed a more nuanced library … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. … Although they are historically well-studied, Alper’s team discovered new gene targets to more efficiently grow on …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses … Neri said. “We invested a lot of our efforts into the post-discovery analyses – as best we could, we tried to describe …
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A Model System for Perennial Grasses
… hallii genomes offer insights to drought tolerance. The Science Researchers have developed a genomic model to study … including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … the primary author on this publication and drove the entire project, Visel explained. She continued working virtually … band together to build proteins. What Wint and her mentors discovered in the genomes helped to reinforce Charles …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … For example, with support from the  Exascale Computing Project , the JGI — along with the National Energy Research …
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Secondary Metabolites Advisory Committee
… teams on how to operate and manage the particular Science Program. …
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Len Pennacchio
… Len Pennacchio is the JGI's Deputy of Genomic Technologies. oClick to learn more about the offerings and capabilities we offer JGI users to help advance their science. … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data …
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