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First Monoploid Reference Sequence of Sugarcane
… polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI was part of an international team led by researchers … of the gene-rich part of the sugarcane genome. Reported in Nature Communications , their approach relied in part on …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, along … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a …
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Pinning Down a Piece of Photosynthesis
… from even the most determined scientist.  Recent work in  Nature Communications takes on the challenge of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … said Crysten Blaby-Haas, a research scientist at the JGI and Molecular Foundry, and the study’s senior author. In …
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Understanding Wildfire Recovery, Starting in Soil
… of which microbes are present. This study, published in Nature Microbiology , went a step further, using both DNA … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI). EMSL and the JGI are DOE Office of Science User …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida high school … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … students look forward to graduating high school in a few months, Benskin shared his own reflections on the …
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Streamlining Regulon Identification in Bacteria
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … target genes in 11 of those. That work published in Nature Communications on June 17 , 2022, was conducted by JGI Director Nigel Mouncey and research scientist Hiroshi …
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An Addiction Crucial to a Fungus’ Reproduction
… and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC … project. As reported in the November 29, 2017 issue of Nature Communications , the team found that the fungus is …
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC … joint appointments as Fungal and Algal Program Head at the JGI, a Senior Scientist at Lawrence Berkeley National … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a … to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  announced in  Nature Microbiology an important addition to the synthetic …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the University of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … with a proposal from UT-Austin’s Tom Juenger, a longtime JGI collaborator and a senior author on this study. The use …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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Busting the Unbreakable Lignin
… California at Santa Barbara  recently published a paper in  Nature Microbiology offering irrefutable evidence that … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes responsible for lignin deconstruction. (The JGI also conducted RNA sequencing and alignment to the …
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